Jae Ho Sohn, MD, MS

Assistant Professor, in Residence Radiology & Biomedical Imaging
Radiology
[email protected]
+1 415 353-9411

Dr. Jae Ho Sohn is a cardiothoracic radiology faculty member at UCSF with research interests in 1) big data applications to lung cancer imaging and percutaneous CT-guided biopsy interventions; 2) radiological natural language processing to analyze and generate optimal radiology reports; 3) clinical translation, validation, and optimization of 0.55T Lung MRI (Siemens Freemax). The lab brings together a multidisciplinary team of physicians, data scientists, MR imaging scientists, and industry partners to discover new knowledge in radiology, validate/optimize clinical workflow, and translate them to the patient bedside.

Publications: 

An open-source fine-tuned large language model for radiological impression generation: a multi-reader performance study.

BMC medical imaging

Serapio A, Chaudhari G, Savage C, Lee YJ, Vella M, Sridhar S, Schroeder JL, Liu J, Yala A, Sohn JH

Nutritional Composition and Safety Aspects of Deep-Sea Whelks (Buccinum tenuissimum Kuroda).

Foods (Basel, Switzerland)

Mansoor S, Lee JH, Bashir KMI, Sohn JH, Choi JS

Mitral Annular Disjunction: An Under-Recognized Entity in Pediatrics.

JACC. Case reports

Alfares FA, Sohn JH, Lee YJ, Farrell R, Delling FN, Avasarala K, Moon-Grady AJ, Anwar S, Austin KM

Effect of Rapid Rollover on Pneumothorax Rate after Percutaneous CT-Guided Lung Biopsy: A Multi-Center, Randomized Controlled Trial.

Journal of vascular and interventional radiology : JVIR

Leng L, Li AT, Lokken P, Kohn M, Wu X, Sohn JH

Underrecognition and Suboptimal Quality of Care for Nonalcoholic Fatty Liver Disease Cirrhosis in Primary Care Patients with Diabetes Mellitus.

The American journal of medicine

Chu JN, Goldman ML, Brandman D, Sohn JH, Islam K, Ross LA, Fox RK

Application of a Domain-specific BERT for Detection of Speech Recognition Errors in Radiology Reports.

Radiology. Artificial intelligence

Chaudhari GR, Liu T, Chen TL, Joseph GB, Vella M, Lee YJ, Vu TH, Seo Y, Rauschecker AM, McCulloch CE, Sohn JH

Prediction of future healthcare expenses of patients from chest radiographs using deep learning: a pilot study.

Scientific reports

Sohn JH, Chen Y, Lituiev D, Yang J, Ordovas K, Hadley D, Vu TH, Franc BL, Seo Y

Clinical language search algorithm from free-text: facilitating appropriate imaging.

BMC medical imaging

Chaudhari GR, Chillakuru YR, Chen TL, Pedoia V, Vu TH, Hess CP, Seo Y, Sohn JH

Longitudinal Analysis of the Effect of Repeated Transarterial Chemoembolization for Liver Cancer on Portal Venous Pressure.

Frontiers in oncology

Frangakis C, Sohn JH, Bas A, Chapiro J, Schernthaner RE, Lin M, Hamilton JP, Pawlik TM, Hong K, Duran R

AI MSK clinical applications: cartilage and osteoarthritis.

Skeletal radiology

Joseph GB, McCulloch CE, Sohn JH, Pedoia V, Majumdar S, Link TM

Federated learning for predicting clinical outcomes in patients with COVID-19.

Nature medicine

Dayan I, Roth HR, Zhong A, Harouni A, Gentili A, Abidin AZ, Liu A, Costa AB, Wood BJ, Tsai CS, Wang CH, Hsu CN, Lee CK, Ruan P, Xu D, Wu D, Huang E, Kitamura FC, Lacey G, de Ant?nio Corradi GC, Nino G, Shin HH, Obinata H, Ren H, Crane JC, Tetreault J, Guan J, Garrett JW, Kaggie JD, Park JG, Dreyer K, Juluru K, Kersten K, Rockenbach MABC, Linguraru MG, Haider MA, AbdelMaseeh M, Rieke N, Damasceno PF, E Silva PMC, Wang P, Xu S, Kawano S, Sriswasdi S, Park SY, Grist TM, Buch V, Jantarabenjakul W, Wang W, Tak WY, Li X, Lin X, Kwon YJ, Quraini A, Feng A, Priest AN, Turkbey B, Glicksberg B, Bizzo B, Kim BS, Tor-D?ez C, Lee CC, Hsu CJ, Lin C, Lai CL, Hess CP, Compas C, Bhatia D, Oermann EK, Leibovitz E, Sasaki H, Mori H, Yang I, Sohn JH, Murthy KNK, Fu LC, de Mendon?a MRF, Fralick M, Kang MK, Adil M, Gangai N, Vateekul P, Elnajjar P, Hickman S, Majumdar S, McLeod SL, Reed S, Gr?f S, Harmon S, Kodama T, Puthanakit T, Mazzulli T, de Lavor VL, Rakvongthai Y, Lee YR, Wen Y, Gilbert FJ, Flores MG, Li Q

Development and web deployment of an automated neuroradiology MRI protocoling tool with natural language processing.

BMC medical informatics and decision making

Chillakuru YR, Munjal S, Laguna B, Chen TL, Chaudhari GR, Vu T, Seo Y, Narvid J, Sohn JH

Algorithmic Prediction of Delayed Radiology Turn-Around-Time during Non-Business Hours.

Academic radiology

Shah V, Chillakuru YR, Rybkin A, Seo Y, Vu T, Sohn JH

High precision localization of pulmonary nodules on chest CT utilizing axial slice number labels.

BMC medical imaging

Chillakuru YR, Kranen K, Doppalapudi V, Xiong Z, Fu L, Heydari A, Sheth A, Seo Y, Vu T, Sohn JH

CT Features of Benign Intrapulmonary Lymph Nodes in Pediatric Patients With Known Extrapulmonary Solid Malignancy.

AJR. American journal of roentgenology

Cho JY, Winant AJ, Sohn JH, Vargas SO, Lee EY

Quantitative Assessment of Myocardial Ischemia With Positron Emission Tomography.

Journal of thoracic imaging

Sohn JH, Behr SC, Hernandez Pampaloni M, Seo Y

Federated Learning used for predicting outcomes in SARS-COV-2 patients.

Research square

Flores M, Dayan I, Roth H, Zhong A, Harouni A, Gentili A, Abidin A, Liu A, Costa A, Wood B, Tsai CS, Wang CH, Hsu CN, Lee CK, Ruan C, Xu D, Wu D, Huang E, Kitamura F, Lacey G, C?sar de Ant?nio Corradi G, Shin HH, Obinata H, Ren H, Crane J, Tetreault J, Guan J, Garrett J, Park JG, Dreyer K, Juluru K, Kersten K, Bezerra Cavalcanti Rockenbach MA, Linguraru M, Haider M, AbdelMaseeh M, Rieke N, Damasceno P, Cruz E Silva PM, Wang P, Xu S, Kawano S, Sriswasdi S, Park SY, Grist T, Buch V, Jantarabenjakul W, Wang W, Tak WY, Li X, Lin X, Kwon F, Gilbert F, Kaggie J, Li Q, Quraini A, Feng A, Priest A, Turkbey B, Glicksberg B, Bizzo B, Kim BS, Tor-Diez C, Lee CC, Hsu CJ, Lin C, Lai CL, Hess C, Compas C, Bhatia D, Oermann E, Leibovitz E, Sasaki H, Mori H, Yang I, Sohn JH, Keshava Murthy KN, Fu LC, Furtado de Mendon?a MR, Fralick M, Kang MK, Adil M, Gangai N, Vateekul P, Elnajjar P, Hickman S, Majumdar S, McLeod S, Reed S, Graf S, Harmon S, Kodama T, Puthanakit T, Mazzulli T, de Lima Lavor V, Rakvongthai Y, Lee YR, Wen Y

Radiomics and Computerized Analysis of CT Images: Looking Forward.

Radiology. Cardiothoracic imaging

Elicker BM, Sohn JH

Domain specific word embeddings for natural language processing in radiology.

Journal of biomedical informatics

Chen TL, Emerling M, Chaudhari GR, Chillakuru YR, Seo Y, Vu TH, Sohn JH

An Open-Source, Vender Agnostic Hardware and Software Pipeline for Integration of Artificial Intelligence in Radiology Workflow.

Journal of digital imaging

Sohn JH, Chillakuru YR, Lee S, Lee AY, Kelil T, Hess CP, Seo Y, Vu T, Joe BN

A deep learning algorithm to detect the presence of basal cell carcinoma on Mohs micrographic surgery frozen sections.

Journal of the American Academy of Dermatology

Sohn GK, Sohn JH, Yeh J, Chen Y, Brian Jiang SI

Automatic Hip Fracture Identification and Functional Subclassification with Deep Learning.

Radiology. Artificial intelligence

Krogue JD, Cheng KV, Hwang KM, Toogood P, Meinberg EG, Geiger EJ, Zaid M, McGill KC, Patel R, Sohn JH, Wright A, Darger BF, Padrez KA, Ozhinsky E, Majumdar S, Pedoia V

Evaluation of Combined Artificial Intelligence and Radiologist Assessment to Interpret Screening Mammograms.

JAMA network open

Schaffter T, Buist DSM, Lee CI, Nikulin Y, Ribli D, Guan Y, Lotter W, Jie Z, Du H, Wang S, Feng J, Feng M, Kim HE, Albiol F, Albiol A, Morrell S, Wojna Z, Ahsen ME, Asif U, Jimeno Yepes A, Yohanandan S, Rabinovici-Cohen S, Yi D, Hoff B, Yu T, Chaibub Neto E, Rubin DL, Lindholm P, Margolies LR, McBride RB, Rothstein JH, Sieh W, Ben-Ari R, Harrer S, Trister A, Friend S, Norman T, Sahiner B, Strand F, Guinney J, Stolovitzky G, and the DM DREAM Consortium, Mackey L, Cahoon J, Shen L, Sohn JH, Trivedi H, Shen Y, Buturovic L, Pereira JC, Cardoso JS, Castro E, Kalleberg KT, Pelka O, Nedjar I, Geras KJ, Nensa F, Goan E, Koitka S, Caballero L, Cox DD, Krishnaswamy P, Pandey G, Friedrich CM, Perrin D, Fookes C, Shi B, Cardoso Negrie G, Kawczynski M, Cho K, Khoo CS, Lo JY, Sorensen AG, Jung H

Development and Validation of a Multitask Deep Learning Model for Severity Grading of Hip Osteoarthritis Features on Radiographs.

Radiology

von Schacky CE, Sohn JH, Liu F, Ozhinsky E, Jungmann PM, Nardo L, Posadzy M, Foreman SC, Nevitt MC, Link TM, Pedoia V

Papillary and sclerosing lesions of the breast detected and biopsied by MRI: Clinical management, upgrade rate, and association with apocrine metaplasia.

The breast journal

Ring NY, diFlorio-Alexander RM, Bond JS, Rosenkranz KM, Cervantes E, Sohn JH, Marotti JD

Large Scale Semi-Automated Labeling of Routine Free-Text Clinical Records for Deep Learning.

Journal of digital imaging

Trivedi HM, Panahiazar M, Liang A, Lituiev D, Chang P, Sohn JH, Chen YY, Franc BL, Joe B, Hadley D

Joint Correction of Attenuation and Scatter Using Deep Convolutional Neural Networks (DCNN) for Time-of-Flight PET

Joint Correction of Attenuation and Scatter Using Deep Convolutional Neural Networks (DCNN) for Time-of-Flight PET

Jaewon Yang, Dookun Park, Jae Ho Sohn, Zhen Jane Wang, Grant T. Gullberg, Youngho Seo

A Deep Learning Model to Predict a Diagnosis of Alzheimer Disease by Using 18F-FDG PET of the Brain.

Radiology

Ding Y, Sohn JH, Kawczynski MG, Trivedi H, Harnish R, Jenkins NW, Lituiev D, Copeland TP, Aboian MS, Mari Aparici C, Behr SC, Flavell RR, Huang SY, Zalocusky KA, Nardo L, Seo Y, Hawkins RA, Hernandez Pampaloni M, Hadley D, Franc BL

Development and Validation of Deep Learning-based Automatic Detection Algorithm for Malignant Pulmonary Nodules on Chest Radiographs.

Radiology

Nam JG, Park S, Hwang EJ, Lee JH, Jin KN, Lim KY, Vu TH, Sohn JH, Hwang S, Goo JM, Park CM

Characteristics of a New X-Ray Imaging System for Interventional Procedures: Improved Image Quality and Reduced Radiation Dose.

Cardiovascular and interventional radiology

Schernthaner RE, Haroun RR, Nguyen S, Duran R, Sohn JH, Sahu S, Chapiro J, Zhao Y, Radaelli A, van der Bom IM, Mauti M, Hong K, Geschwind JH, Lin M

Prospective Comparison of Diagnostic Accuracy Between Point-of-Care and Conventional Ultrasound in a General Diagnostic Department: Implications for Resource-Limited Settings.

Journal of ultrasound in medicine : official journal of the American Institute of Ultrasound in Medicine

Haider SJA, diFlorio-Alexander R, Lam DH, Cho JY, Sohn JH, Harris R

Validation of the Hong Kong Liver Cancer Staging System in Determining Prognosis of the North American Patients Following Intra-arterial Therapy.

Clinical gastroenterology and hepatology : the official clinical practice journal of the American Gastroenterological Association

Sohn JH, Duran R, Zhao Y, Fleckenstein F, Chapiro J, Sahu S, Schernthaner RE, Qian T, Lee H, Zhao L, Hamilton J, Frangakis C, Lin M, Salem R, Geschwind JF

Transarterial Chemoembolization for the Treatment of Advanced-Stage Hepatocellular Carcinoma.

Journal of gastrointestinal surgery : official journal of the Society for Surgery of the Alimentary Tract

Zhao Y, Duran R, Chapiro J, Sohn JH, Sahu S, Fleckenstein F, Smolka S, Pawlik TM, Schernthaner R, Zhao L, Lee H, He S, Lin M, Geschwind JF

Renal Cell Carcinoma Metastatic to the Liver: Early Response Assessment after Intraarterial Therapy Using 3D Quantitative Tumor Enhancement Analysis.

Translational oncology

Fleckenstein FN, Schernthaner RE, Duran R, Sohn JH, Sahu S, Marshall K, Lin M, Gebauer B, Chapiro J, Salem R, Geschwind JF

Improved Visibility of Metastatic Disease in the Liver During Intra-Arterial Therapy Using Delayed Arterial Phase Cone-Beam CT.

Cardiovascular and interventional radiology

Schernthaner RE, Haroun RR, Duran R, Lee H, Sahu S, Sohn JH, Chapiro J, Zhao Y, Gorodetski B, Fleckenstein F, Smolka S, Radaelli A, van der Bom IM, Lin M, Geschwind JF

3D Quantitative tumour burden analysis in patients with hepatocellular carcinoma before TACE: comparing single-lesion vs. multi-lesion imaging biomarkers as predictors of patient survival.

European radiology

Fleckenstein FN, Schernthaner RE, Duran R, Sohn JH, Sahu S, Zhao Y, Hamm B, Gebauer B, Lin M, Geschwind JF, Chapiro J

Multimodality Imaging of Ethiodized Oil-loaded Radiopaque Microspheres during Transarterial Embolization of Rabbits with VX2 Liver Tumors.

Radiology

Tacher V, Duran R, Lin M, Sohn JH, Sharma KV, Wang Z, Chapiro J, Gacchina Johnson C, Bhagat N, Dreher MR, Sch?fer D, Woods DL, Lewis AL, Tang Y, Grass M, Wood BJ, Geschwind JF

Comparison of Existing Response Criteria in Patients with Hepatocellular Carcinoma Treated with Transarterial Chemoembolization Using a 3D Quantitative Approach.

Radiology

Tacher V, Lin M, Duran R, Yarmohammadi H, Lee H, Chapiro J, Chao M, Wang Z, Frangakis C, Sohn JH, Maltenfort MG, Pawlik T, Geschwind JF

Radiologic-pathologic analysis of quantitative 3D tumour enhancement on contrast-enhanced MR imaging: a study of ROI placement.

European radiology

Chockalingam A, Duran R, Sohn JH, Schernthaner R, Chapiro J, Lee H, Sahu S, Nguyen S, Geschwind JF, Lin M

Feasibility of a Modified Cone-Beam CT Rotation Trajectory to Improve Liver Periphery Visualization during Transarterial Chemoembolization.

Radiology

Schernthaner RE, Chapiro J, Sahu S, Withagen P, Duran R, Sohn JH, Radaelli A, van der Bom IM, Geschwind JF, Lin M

Class 3 semaphorin mediates dendrite growth in adult newborn neurons through Cdk5/FAK pathway.

PloS one

Ng T, Ryu JR, Sohn JH, Tan T, Song H, Ming GL, Goh EL

Quality initiatives: statistical control charts: simplifying the analysis of data for quality improvement.

Radiographics : a review publication of the Radiological Society of North America, Inc

Cheung YY, Jung B, Sohn JH, Ogrinc G